Alienness Tool Submit your data Output blast with taxid in last column (-outfmt '7 std staxid' = tabular with comment lines or -outfmt '6 std staxid' = tabular) OR diamond * Only compressed formats 'zip' or 'gz' are allowed Project name * Please, fill this field without any accent or space Taxonomic group of interest * Enter the NCBI TaxID of the donor group of interest. ONLY 1 TaxID is allowed. In this example : 33208 corresponds to Metazoa. In this case, you are interested in HGT of non-metazoan origin to a metazoan species. Taxonomic group(s) to exclude * Enter the NCBI TaxIDs (one or several) for the taxonomic groups you want to ignore in the calculation of the Alien index. You must at least input the TaxID of the query species you used to produce the BLAST result. In this example : 211167,312687,33284 correspond respectively to Criconematoidea, Sphaerularioidea and Tylenchoidea Additional taxonomic group(s) used to classify potential donors : By default, the taxonomic groups found are categorized as Archaea, Bacteria, Viruses, Eukaryota, Eukaryota@Fungi, Eukaryota@Metazoa, Eukaryota@Stramenopiles, Eukaryota@Viridiplantae and the taxonomic group of interest. see NCBI TaxID If you want to add categories, fill in this field with the desired taxonomic nodes separated by a comma. In this example: 3041,35493 correspond respectively to Chlorophyta and Streptophyta Your email * Upload Progress Loading...
